CDS

Accession Number TCMCG077C14877
gbkey CDS
Protein Id KAF5740133.1
Location join(1400190..1400291,1400919..1401064,1401644..1401763,1402054..1402195,1402299..1402469,1402561..1402722,1402818..1402924,1403032..1403122,1403244..1403385,1403472..1403625,1404046..1404159,1404396..1404522,1404621..1404744,1406516..1406575,1406710..1406857,1407142..1407283,1407362..1407532,1407619..1407774,1407866..1407972,1408104..1408194,1408296..1408437,1408538..1408694,1408772..1408888,1408983..1409109,1409208..1409468)
Organism Tripterygium wilfordii
locus_tag HS088_TW11G00199

Protein

Length 1126aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000011.1
Definition rhamnogalacturonate lyase B [Tripterygium wilfordii]
Locus_tag HS088_TW11G00199

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGCCTCGTCGCCGTCTTCTTCTTCTTTTCTTTACTTTGTCATGGTCTTTGGCCTTGGCATCATCATCTTCAGGGGTGCAACTGCATGTGTATGATGAATATAATGACCAAAATGAATTGACTCGTGATTGTGAATTTGAAAGGTACTGGGACCTCGTTTGGAGCAAACCCAACGGTACTGCTCCTCCAAGAACAAATGGGCCAGGCCCAATTGGCAAGAAGAAGAAGTACAAGGGCACTTTGGACAGGATGATAGCAACAGAAATGAAGGTGATAGTGCAGAATGAAGAGCAGGTAGAGCTCTCATTCACCAGAGAGTGGAATTCTTCACTAGAATACACGCAAGTCCCCTTGAACATTGACAAAAGATTTCATTATATGGCCATTTCAGACAGTAGACAACGATATATGCCTCTTCCGGATGACCGGTCACCGGAAAGAGGTCAGGCCCTAGCATATCCAGAAGCAGTCCTACTTGTAAATCCTGTGGAGCCAGAATTTAAAGGAGAGGTGGATGATAAATACCAATACGCGTGTGAGAGCAAAGACATTGGGGTCCATGGATGGATTAGCAATGACACTGGTATTGGGTTCTGGCAAATTTCACCCAGCAATGAGTTTCGGTCTGGGGGGCCCTTTAAACAATTCCTAAACTCCCATGTTGGTCCGACAAACCTCGGTATATTCCATAGCACTCATTATGCAGGACCTGATATGATAATAAAATTTGAAGATGGCGAGCAATGGAAGAAAGTTTATGGTCCCATCTTTATCTATGTTAATTCATTGTCCGAGAGAAATGGAAATGTTACATCTAAGCTTTGGGAGGATGCTAAAGAACAGTTGAATAAAGAAGGTCAAAGCTGGCCCTATAGTTTCCTGGCTTCAGAAGATTTTCCGAAATCAAATCAGCGTGGGAATATCAACGGCAGGTTACTGGTCGAAGATAGGTATGTATGTGAGAGAAAGGTATCTGCAAAGGGTGCTTATGTGGGGTTGGCACTCCCTGGAGATGCTGGCTCCTGGCAACTAGAAAGCAAGGGTTACCAATTTTGGTCCAAGACAGATGAGGATGGATATTTCTCCATTGATAATATAAGGACTGGCGAATATAATCTTTATGCTTCTATACCTGGTTTTATTGGAGATTTCCGTTACAATGACCTCATCAGTATTACTGGAGGCTGCAGCTTAGAAGTGGGTGACCTTGTATATAAGCCTCCGAGAAATGGCTCCACATTGTGGGAAATAGGCATCCCTAATCGCTCTGCTGCCGAATTTTATGTTCTTGATCCTAACCCAAAGCTCATCAATAAGCTTTATGTCCATACTGACAGATTTAGGCAGTATGGATTGTGGGAAAGATATACGGAATTGCACCCTCATCAAGATTTGGTCTACAAAATTGGCGACGACTATAGAAAAGATTGGTTCTTTGTTCAAGTTACCAGAAGCTTAGATAATAGCACATATGAAGGAACTACATGGCAAATCAAGTTCGAATTCGATAAAGGTGATCATAACGGAACTTATACACTTAGAGTGGCACTGGCAACTGCACATGTTTCTGAATTGCAGGTTCGAATTAACGATCAAAATGCAACTTCTCCCCTATTTTCAACTGGAATCATTGGGAACGATAACACAATCGCGAGACATGGAATTCACGGGCTCTATCGACTATACAATGTAGATGTTCCTGGTACTGGGATCTTGTTTGGAGCGAGGAAGGAACAACCGGAACAACAGGAACAGACTACCGGCTGTGTTTGTGGTAAAAAAATCTGCAGGATTGGAGGAAAAAGTTTCAGAGTAGTAGTGGAAAATGAAGAACAAGTAGAAATCTCATTCACAAGCAGTTGGGATCGGTCGCTTGAAGGCAAAATTGTTCCCCTAAATATAGACAAAAGGTTTCACTACATGGCAATAGCAGATAACCGGCAAAGATATATGCCGTTACCAGACGACAGGCTGCCAAGAAGGGGCAAAGAACTGGCATACCCTGAGGCTGTACTTCTTGTCAAACCAGTAGAGCCAGAGTTTACAGGAGAGGTAGATGACAAATATCTATACTCGAGTGAGAACAGAAATCTTAAAGTACATGGATGGATGTGCTTTGATCCGCCGGTGGGGTTCTGGCAGATCACACCCAGCAATGAGTTCCGAACAGGCGGACCTCTCAAACAAAACTTAACCTCTCATGTTGGCCCCATCACTCTTGCTATGTTTTTAAGCGCTCACTATGTGGGAGAGGATATGGTGCTGAAATTCAAGGAGGGAGAACCATGGAAGAAAGTTTTTGGACCTGTTTTTATCTACTTGAATTCTTTGATTGATGATGAGAGTCCACTTTCTTTGTGGGAAGATGCCAAACAACAGATGTGGATTGAAGAGCAAAGCTGGCCTTACACCTTCCCACAATCAGATGATTTTCCGCAGTCTGATCAACGGGGAAATGTAAGTGGAAGATTACGTATAAGGGACAGGTACGTTAGCGATGACTATATATCAGCAGAAGGAGCTTATGTAGGTTTGGCTCCTCCAGGGGATGTTGGATCCTGGCAATTAGAGAGCAAGGGTTACCAATTCTGGACAAAAGCTGATGCAGAAGGTTATTTCTGCATCAATGATATACGTACTGGCGATTATAATCTTTACGCGTGGATGTCTGGATTCATTGGAGATTATAGATATGATTCTGTCATTACCATAACAGCAGGTTCTGATATTGACATGGGTGACCTCACGTATGAACCCCCAAGACACGGCCCTACGTTGTGGGAGATAGGCATCCCAGACCGTACTGCTGCAGAATTCTACATTCCCAATCCGAATCCAATGTACATCAACAAACTTTATGTCAATCATCCTGACAGGTATAGACAGTATGGACTCTGGGAAAGATACACGGATTTATACCCAGATAAGGACTTGGTGTACATAGTTGGTGTTAGTGATTACACAAAAGATTGGTTCTTTGCTCATGTTCCAAGGAAGAAAGATGATGGCAGCTACCAAGCAACAACATGGCAGATCAAATTCAACATCGACAATGCAGATCAAAGCGCAAACTACAAGCTACTACTAGCACTTGCAACAGCCAATTCAGCAGAATTGCAGGTTCGCGTGAATGATCCGGAACCAAGTCCTCCTCTATTTTCGACTGGAAATATTGGACATGACAACACAATAGCTAGGCATGGTATTCATGGGATTTACAGGCTTTACAGTGTAGTCATTCCCGGTGGTCAGCTTGTGGAAGGAGAGAATACCATTTATTTGACACAAGCAATGGCAAGCAGCCCTTTTGAAGGAATCATGTATGACTACATCCGCCTAGAAGGACCTCCATCTTCTAGTTCTTTAAGCAAACAAATCTGA
Protein:  
MPRRRLLLLFFTLSWSLALASSSSGVQLHVYDEYNDQNELTRDCEFERYWDLVWSKPNGTAPPRTNGPGPIGKKKKYKGTLDRMIATEMKVIVQNEEQVELSFTREWNSSLEYTQVPLNIDKRFHYMAISDSRQRYMPLPDDRSPERGQALAYPEAVLLVNPVEPEFKGEVDDKYQYACESKDIGVHGWISNDTGIGFWQISPSNEFRSGGPFKQFLNSHVGPTNLGIFHSTHYAGPDMIIKFEDGEQWKKVYGPIFIYVNSLSERNGNVTSKLWEDAKEQLNKEGQSWPYSFLASEDFPKSNQRGNINGRLLVEDRYVCERKVSAKGAYVGLALPGDAGSWQLESKGYQFWSKTDEDGYFSIDNIRTGEYNLYASIPGFIGDFRYNDLISITGGCSLEVGDLVYKPPRNGSTLWEIGIPNRSAAEFYVLDPNPKLINKLYVHTDRFRQYGLWERYTELHPHQDLVYKIGDDYRKDWFFVQVTRSLDNSTYEGTTWQIKFEFDKGDHNGTYTLRVALATAHVSELQVRINDQNATSPLFSTGIIGNDNTIARHGIHGLYRLYNVDVPGTGILFGARKEQPEQQEQTTGCVCGKKICRIGGKSFRVVVENEEQVEISFTSSWDRSLEGKIVPLNIDKRFHYMAIADNRQRYMPLPDDRLPRRGKELAYPEAVLLVKPVEPEFTGEVDDKYLYSSENRNLKVHGWMCFDPPVGFWQITPSNEFRTGGPLKQNLTSHVGPITLAMFLSAHYVGEDMVLKFKEGEPWKKVFGPVFIYLNSLIDDESPLSLWEDAKQQMWIEEQSWPYTFPQSDDFPQSDQRGNVSGRLRIRDRYVSDDYISAEGAYVGLAPPGDVGSWQLESKGYQFWTKADAEGYFCINDIRTGDYNLYAWMSGFIGDYRYDSVITITAGSDIDMGDLTYEPPRHGPTLWEIGIPDRTAAEFYIPNPNPMYINKLYVNHPDRYRQYGLWERYTDLYPDKDLVYIVGVSDYTKDWFFAHVPRKKDDGSYQATTWQIKFNIDNADQSANYKLLLALATANSAELQVRVNDPEPSPPLFSTGNIGHDNTIARHGIHGIYRLYSVVIPGGQLVEGENTIYLTQAMASSPFEGIMYDYIRLEGPPSSSSLSKQI